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© Arne Elofsson

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23383 : APW78911.1 F [HUMAN RESPIRATORY SYNCYTIAL VIRUS B]

Your submitted sequence: sequence (574 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.3
-0.111E+030.0760.1150.273 1G5G_AN/A
2
rpsblast.2
4e-870.0860.1050.182 1G5G_AN/A
3
ffas.11
-0.247E+020.0190.0240.042 1SVF_A1.20.5.300.1.1
4
rpsblast.6
0.0150.0070.0070.005 1U84_A1.10.340.20.1.1
5
ffas.8
-0.298E+020.0160.011-0.010 1WP7_AN/A
6
ffas.9
-0.297E+020.0180.014-0.004 1WP8_AN/A
7
ffas.5
-0.105E+030.0770.1220.303 1ZTM_AN/A
8
pgenthreader.9
146.8650.0620.1130.319 1ZTM_AN/A
9
rpsblast.3
2e-840.0750.1040.221 1ZTM_CN/A
10
ffas.1
-0.113E+030.0910.1450.363 2B9B_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center