Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23382 : Salmon_PD!

Your submitted sequence: sequence (274 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.17	-0.484E+02	0.130	0.173	0.344	1CID_A	N/A
2	ffas.20	-0.480E+02	0.170	0.213	0.387	1F97_A	2.60.40.10.107.1 2.60.40.10.99.1
3	ffas.11	-0.501E+02	0.167	0.211	0.389	1G9M_C	2.60.40.10.65.1 2.60.40.10.128.1
4	ffas.7	-0.523E+02	0.176	0.244	0.515	1I8L_A	2.60.40.10.131.1 2.60.40.10.146.1
5	ffas.18	-0.484E+02	0.163	0.211	0.405	1L6Z_A	2.60.40.10.148.1 2.60.40.10.152.1
6	ffas.15	-0.487E+02	0.175	0.216	0.378	1NBQ_A	2.60.40.10.107.1 2.60.40.10.99.1
7	rpsblast.6	9e-16	0.215	0.224	0.259	1PKO_A	2.60.40.10.46.1
8	ffas.16	-0.484E+02	0.140	0.186	0.372	2C5D_C	N/A
9	ffas.5	-0.536E+02	0.174	0.219	0.399	2CH8_A	N/A
10	ffas.4	-0.545E+02	0.191	0.230	0.386	2FBO_J	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.