Pcons.net Protein Structure Prediction

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Wednesday, April 24 2024

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Submission

23380 : Phosphoheptose isomerase

Your submitted sequence: sequence (196 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.852E+02	0.665	0.687	0.777	2X3Y_A	N/A
2	ffas.3	-0.822E+02	0.670	0.679	0.717	1X92_A	3.40.50.10490.10.1
3	ffas.6	-0.806E+02	0.663	0.677	0.731	2YVA_A	N/A
4	ffas.2	-0.833E+02	0.665	0.676	0.722	1TK9_A	3.40.50.10490.10.2
5	ffas.4	-0.816E+02	0.635	0.639	0.654	3TRJ_A	N/A
6	ffas.5	-0.807E+02	0.617	0.625	0.658	2I22_A	N/A
7	ffas.7	-0.797E+02	0.610	0.620	0.660	1X94_A	3.40.50.10490.10.3
8	rpsblast.1	7e-34	0.576	0.612	0.754	2XBL_C	N/A
9	rpsblast.2	1e-30	0.576	0.602	0.705	1TK9_C	3.40.50.10490.10.2
10	pgenthreader.1	107.966	0.555	0.601	0.787	2XBL_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.