Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23378 : 5xjv

Your submitted sequence: sequence (185 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.846E+02	0.594	0.606	0.654	1J4X_A	3.90.190.10.8.1
2	ffas.11	-0.757E+02	0.349	0.368	0.443	1M3G_A	3.90.190.10.10.3
3	ffas.20	-0.739E+02	0.503	0.516	0.568	1MKP_A	N/A
4	rpsblast.8	4e-34	0.521	0.525	0.539	1MKP_A	N/A
5	ffas.14	-0.754E+02	0.578	0.590	0.636	1WRM_A	N/A
6	pgenthreader.5	90.595	0.571	0.581	0.619	1WRM_A	N/A
7	rpsblast.4	8e-36	0.606	0.614	0.647	1WRM_A	N/A
8	ffas.10	-0.758E+02	0.571	0.587	0.650	1YZ4_A	N/A
9	pgenthreader.10	88.627	0.575	0.584	0.622	1YZ4_A	N/A
10	ffas.4	-0.810E+02	0.499	0.507	0.540	2E0T_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.