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© Arne Elofsson

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23378 : 5xjv

Your submitted sequence: sequence (185 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.7
1e-340.6210.6520.774 2PQ5_AN/A
2
ffas.3
-0.832E+020.6120.6320.713 2PQ5_AN/A
3
pgenthreader.6
90.1540.5930.6230.741 2PQ5_AN/A
4
rpsblast.4
8e-360.6060.6140.647 1WRM_AN/A
5
ffas.1
-0.853E+020.6010.6110.652 2Y96_AN/A
6
rpsblast.2
2e-380.6000.6110.655 2Y96_AN/A
7
rpsblast.5
4e-350.6080.6110.622 3EZZ_FN/A
8
ffas.2
-0.846E+020.5940.6060.654 1J4X_A3.90.190.10.8.1
9
pgenthreader.7
89.9510.5920.6050.659 2G6Z_AN/A
10
ffas.16
-0.747E+020.5830.6020.680 2G6Z_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center