Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23368 : T0978

Your submitted sequence: sequence (416 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.5	-0.578E+02	0.066	0.131	0.390	1EFZ_A	3.20.20.105.1.1
2	pgenthreader.10	21.278	0.024	0.035	0.078	1F76_A	3.20.20.70.46.2
3	ffas.6	-0.501E+02	0.054	0.123	0.400	1IQ8_A	3.20.20.105.2.1 3.90.1020.10.1.1 3.10.450.90.1.1 2.30.130.10.2.1
4	pgenthreader.3	42.763	0.081	0.091	0.129	1IQ8_A	3.20.20.105.2.1 3.90.1020.10.1.1 3.10.450.90.1.1 2.30.130.10.2.1
5	pgenthreader.5	22.563	0.000	0.007	0.036	1OZS_B	N/A
6	pgenthreader.8	14.475	0.001	0.003	0.012	1Q68_A	N/A
7	pgenthreader.9	14.475	0.002	0.003	0.005	1Q68_A	N/A
8	rpsblast.7	0.90	0.003	0.001	-0.009	1QZV_U	N/A
9	rpsblast.8	2.2	0.006	0.004	-0.003	1QZV_U	N/A
10	rpsblast.9	2.6	0.007	0.006	0.001	1QZV_U	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.