Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23364 : 9r

Your submitted sequence: sequence (279 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.118E+03	0.531	0.552	0.635	1DZB_A	2.60.40.10.6.2 2.60.40.10.4.3
2	pgenthreader.8	175.137	0.477	0.505	0.616	1DZB_A	2.60.40.10.6.2 2.60.40.10.4.3
3	ffas.13	-0.105E+03	0.463	0.493	0.615	1F3R_B	2.60.40.10.23.3 2.60.40.10.165.1
4	rpsblast.5	1e-53	0.433	0.468	0.609	1F3R_B	2.60.40.10.23.3 2.60.40.10.165.1
5	ffas.20	-0.850E+02	0.337	0.373	0.519	1H8N_A	2.60.40.10.3.1 2.60.40.10.10.1
6	ffas.12	-0.111E+03	0.332	0.383	0.585	1LMK_A	2.60.40.10.6.4 2.60.40.10.20.1
7	rpsblast.8	4e-49	0.327	0.375	0.567	1LMK_A	2.60.40.10.6.4 2.60.40.10.20.1
8	ffas.17	-0.858E+02	0.320	0.351	0.477	1MEX_H	2.60.40.10.6.1 2.60.40.10.8.1
9	ffas.9	-0.112E+03	0.337	0.391	0.605	1NQB_A	2.60.40.10.10.1 2.60.40.10.7.1
10	pgenthreader.4	180.184	0.327	0.370	0.541	1NQB_A	2.60.40.10.10.1 2.60.40.10.7.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.