Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

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Submission

23363 : spe-11

Your submitted sequence: sequence (299 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.6	-0.488E+01	0.040	0.063	0.153	1CEM_A	N/A
2	pgenthreader.8	34.886	0.033	0.061	0.172	1IS1_A	1.10.132.20.1.2 3.30.1360.40.3.2
3	rpsblast.7	16	0.040	0.043	0.056	1MG1_A	3.40.190.10.37.1 3.40.190.10.40.1 1.10.287.210.4.1
4	ffas.3	-0.519E+01	0.029	0.039	0.080	1QYS_A	3.30.1710.10.1.1
5	rpsblast.3	0.56	0.004	0.007	0.019	1QZV_U	N/A
6	rpsblast.5	6.4	0.011	0.009	0.002	1QZV_U	N/A
7	ffas.7	-0.485E+01	0.007	0.016	0.051	1T07_A	N/A
8	ffas.8	-0.481E+01	0.008	0.013	0.031	1XS8_A	N/A
9	pgenthreader.6	14.959	0.036	0.068	0.198	2AP3_A	N/A
10	pgenthreader.7	14.959	0.010	0.029	0.105	2AP3_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.