Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23362 : F56

Your submitted sequence: sequence (385 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.414E+01	0.016	0.020	0.038	1AU7_A	1.10.260.40.1.2 1.10.10.60.9.1
2	ffas.6	-0.431E+01	0.000	0.012	0.061	1DEB_A	1.20.5.10.2.1
3	ffas.10	-0.410E+01	0.000	0.009	0.043	1LJP_A	1.10.239.10.1.1
4	pgenthreader.1	31.250	0.007	0.074	0.343	1NU7_D	N/A
5	rpsblast.6	0.98	0.000	0.004	0.018	1QZV_U	N/A
6	rpsblast.7	1.0	0.003	0.007	0.021	1QZV_U	N/A
7	rpsblast.8	1.3	0.000	0.003	0.015	1QZV_U	N/A
8	ffas.5	-0.435E+01	0.004	0.026	0.116	1RP3_B	N/A
9	ffas.1	-0.529E+01	0.002	0.012	0.051	1WIV_A	1.10.8.10.23.1
10	rpsblast.9	2.1	0.007	0.016	0.054	1X9Z_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.