Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23360 : CC2_aa687-735

Your submitted sequence: sequence (48 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	19.000	0.095	0.114	0.191	1L1O_C	2.40.50.140.53.1 2.20.25.10.5.1
2	rpsblast.5	1.1	0.078	0.113	0.255	1M1J_A	1.20.5.50.14.1
3	rpsblast.8	2.5	0.090	0.101	0.146	1M1J_A	1.20.5.50.14.1
4	ffas.8	-0.296E+01	0.084	0.101	0.168	1KQF_C	1.20.950.20.1.1
5	pgenthreader.5	19.045	0.104	0.100	0.086	3CKC_A	N/A
6	pgenthreader.9	19.000	0.092	0.100	0.131	2LID_A	N/A
7	rpsblast.4	0.81	0.081	0.087	0.109	1M1J_A	1.20.5.50.14.1
8	rpsblast.6	1.5	0.081	0.087	0.109	4FFB_B	N/A
9	pgenthreader.6	19.035	0.068	0.079	0.123	1IZL_C	N/A
10	rpsblast.10	7.1	0.096	0.078	0.008	1M1J_A	1.20.5.50.14.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.