Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23358 : PNPLA2

Your submitted sequence: sequence (504 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.911E+01	0.025	0.039	0.094	1CJY_A	2.60.40.150.8.1 3.40.1090.10.2.1
2	pgenthreader.8	34.579	0.015	0.042	0.151	1FMJ_A	3.40.50.300.147.1
3	pgenthreader.7	34.642	0.022	0.041	0.118	1GQI_A	3.30.379.10.1.1 3.20.20.80.14.2 3.90.1330.10.1.1
4	ffas.8	-0.593E+01	0.018	0.025	0.053	1M33_A	3.40.50.1820.31.1
5	ffas.2	-0.346E+02	0.043	0.083	0.241	1OXW_A	3.40.1090.10.1.1
6	pgenthreader.2	47.969	0.048	0.090	0.256	1OXW_A	3.40.1090.10.1.1
7	rpsblast.8	2e-04	0.045	0.069	0.165	1OXW_B	3.40.1090.10.1.1
8	pgenthreader.10	33.731	0.015	0.039	0.135	1SXJ_A	N/A
9	pgenthreader.9	34.504	0.018	0.041	0.133	2BNX_A	N/A
10	ffas.6	-0.711E+01	0.004	-0.001	-0.022	2LOO_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.