Pcons.net Protein Structure Prediction

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Saturday, April 27 2024

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Submission

23356 : SP|P47211|GALR1_HUMAN GALANIN RECEPTOR TYPE 1 OS=HOMO SAPIENS OX=9606 GN=GALR1 PE=1 SV=3

Your submitted sequence: sequence (349 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.855E+02	0.197	0.282	0.622	1GZM_A	1.20.1070.10.6.1
2	rpsblast.3	8e-04	0.036	0.032	0.016	1HOF_A	N/A
3	pgenthreader.8	13.385	0.267	0.329	0.577	1U19_A	1.20.1070.10.6.1
4	pgenthreader.9	13.385	0.000	0.005	0.027	1U19_A	1.20.1070.10.6.1
5	ffas.1	-0.948E+02	0.209	0.298	0.654	2KS9_A	N/A
6	pgenthreader.1	13.903	0.256	0.319	0.570	2KS9_A	N/A
7	pgenthreader.2	13.903	0.001	-0.012	-0.066	2KS9_A	N/A
8	ffas.3	-0.865E+02	0.099	0.189	0.547	2LNL	N/A
9	pgenthreader.5	113.732	0.107	0.175	0.445	2LNL_A	N/A
10	rpsblast.1	1e-05	0.035	0.037	0.046	2LOW_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.