Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23349 : id:23348:1-174

Your submitted sequence: sequence (174 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 25 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.7	-0.705E+01	0.080	0.162	0.489	1JCH_A	N/A
2	rpsblast.1	13	0.061	0.092	0.214	1M1J_A	1.20.5.50.14.1
3	rpsblast.7	333	0.022	0.032	0.072	1M1J_A	1.20.5.50.14.1
4	rpsblast.8	547	0.070	0.099	0.213	1M1J_A	1.20.5.50.14.1
5	pgenthreader.10	23.686	0.028	0.086	0.318	1Q0V_A	N/A
6	pgenthreader.9	23.686	0.028	0.085	0.313	1Q0V_A	N/A
7	pgenthreader.4	33.886	0.055	0.108	0.322	1W9R_A	N/A
8	pgenthreader.2	14.000	0.088	0.200	0.647	1XQ8_A	1.10.287.700.1.1
9	pgenthreader.3	14.000	0.013	0.020	0.046	1XQ8_A	1.10.287.700.1.1
10	pgenthreader.5	33.748	0.038	0.160	0.646	2C3F_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.