Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23347 : SP|P29279|27-349

Your submitted sequence: sequence (323 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.3	-0.826E+02	0.518	0.539	0.623	1J4X_A	3.90.190.10.8.1
2	ffas.13	-0.731E+02	0.294	0.317	0.409	1M3G_A	3.90.190.10.10.3
3	rpsblast.5	0.013	0.461	0.485	0.580	1MKP_A	N/A
4	ffas.11	-0.742E+02	0.480	0.505	0.605	1WRM_A	N/A
5	pgenthreader.5	14.570	0.518	0.545	0.654	1WRM_A	N/A
6	pgenthreader.6	14.570	0.010	0.020	0.059	1WRM_A	N/A
7	ffas.10	-0.745E+02	0.467	0.493	0.595	1YZ4_A	N/A
8	ffas.4	-0.796E+02	0.439	0.459	0.540	2E0T_A	N/A
9	pgenthreader.4	95.904	0.443	0.469	0.571	2E0T_A	N/A
10	rpsblast.3	0.002	0.441	0.452	0.494	2E0T_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.