Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23344 :

Your submitted sequence: sequence (549 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.831E+01	0.030	0.099	0.373	1KPL_A	1.10.3080.10.1.1
2	ffas.4	-0.302E+02	0.131	0.201	0.481	1PV6_A	N/A
3	ffas.1	-0.719E+02	0.184	0.251	0.519	1PW4_A	N/A
4	pgenthreader.1	116.894	0.160	0.230	0.508	1PW4_A	N/A
5	rpsblast.1	5e-31	0.153	0.217	0.473	1PW4_A	N/A
6	ffas.10	-0.831E+01	0.004	0.015	0.057	1W9R_A	N/A
7	rpsblast.10	5e-09	0.080	0.097	0.163	2CFQ_A	N/A
8	rpsblast.3	1e-29	0.127	0.182	0.403	2CFQ_A	N/A
9	ffas.2	-0.351E+02	0.133	0.191	0.421	2GFP_A	N/A
10	pgenthreader.6	86.658	0.120	0.186	0.449	2GFP_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.