Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23340 :

Your submitted sequence: sequence (67 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.5	-0.565E+02	0.745	0.753	0.786	1C9O_A	2.40.50.140.16.1
2	pgenthreader.5	67.936	0.797	0.795	0.786	1C9O_A	2.40.50.140.16.1
3	rpsblast.1	3e-31	0.782	0.790	0.821	1C9O_A	2.40.50.140.16.1
4	ffas.2	-0.576E+02	0.725	0.730	0.752	1CSP_A	N/A
5	ffas.10	-0.546E+02	0.601	0.609	0.643	1G6P_A	2.40.50.140.16.1
6	pgenthreader.7	63.712	0.609	0.608	0.604	1G6P_A	2.40.50.140.16.1
7	rpsblast.4	2e-29	0.599	0.608	0.646	1G6P_A	2.40.50.140.16.1
8	ffas.18	-0.463E+02	0.632	0.643	0.688	1H95_A	2.40.50.140.16.3
9	pgenthreader.10	56.672	0.579	0.585	0.610	1H95_A	2.40.50.140.16.3
10	ffas.6	-0.565E+02	0.748	0.760	0.807	1HZ9_A	2.40.50.140.16.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.