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Friday, March 29 2024
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Arne Elofsson
23333 : popcorn
Your submitted sequence:
sequence (539 aa)
Ready methods:
PCONS
PMODELLER
ffas
pgenthreader
rpsblast
Queued locally:
lomets itasser
rpsblast
Rank
Model
Method Score
Pcons
Pcomb
ProQ2
ProQ / ProQresSum
Template
CATH
Alignment
1
7e-23
0.062
0.068
0.094
3NFQ_A
N/A
2
2e-22
0.060
0.074
0.131
2XPP_A
N/A
3
2e-16
0.001
-0.001
-0.009
4MP0_B
N/A
4
7e-13
0.043
0.053
0.092
1WJT_A
1.25.40.260.1.1
5
6e-07
0.005
0.029
0.127
2PFF_B
N/A
6
2e-04
0.002
0.005
0.015
2PFF_B
N/A
7
0.002
0.004
0.010
0.033
2PFF_B
N/A
8
0.009
0.005
0.017
0.064
2PFF_B
N/A
9
0.054
0.003
0.006
0.016
2PFF_B
N/A
10
0.056
0.004
0.016
0.063
4DGW_C
N/A
References
Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [
LINK
]
© 2006 Stockholm University, Stockholm Bioinformatics Center