Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23333 : popcorn

Your submitted sequence: sequence (539 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 28 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.7	41.036	0.003	0.025	0.113	1N7D_A	N/A
2	pgenthreader.1	47.123	0.002	0.033	0.155	1OQY_A	N/A
3	ffas.5	-0.207E+02	0.021	0.037	0.103	1WJT_A	1.25.40.260.1.1
4	rpsblast.4	7e-13	0.043	0.053	0.092	1WJT_A	1.25.40.260.1.1
5	ffas.9	-0.826E+01	0.015	0.025	0.063	1Z9E_A	N/A
6	pgenthreader.4	44.536	0.004	0.034	0.155	2C3F_A	N/A
7	rpsblast.5	6e-07	0.005	0.029	0.127	2PFF_B	N/A
8	rpsblast.6	2e-04	0.002	0.005	0.015	2PFF_B	N/A
9	rpsblast.7	0.002	0.004	0.010	0.033	2PFF_B	N/A
10	rpsblast.8	0.009	0.005	0.017	0.064	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.