Pcons.net Protein Structure Prediction

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Thursday, April 25 2024

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Submission

23327 : syt1

Your submitted sequence: sequence (419 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

rpsblast

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	ProQ / ProQresSum	Template	CATH	Alignment
1	N/A	1e-65	N/A	N/A	N/A	N/A	1dqv_A	2.60.40.150.5.2 2.60.40.150.1.3	N/A
1		1e-65	0.245	0.251	0.274		1UM0_C	N/A
2		8e-52	0.165	0.168	0.181		2O11_A	N/A
2	N/A	8e-52	N/A	N/A	N/A	N/A	1w15_A	2.60.40.150.1.2	N/A
3		7e-45	0.049	0.075	0.177		4OB9_B	N/A
3	N/A	7e-45	N/A	N/A	N/A	N/A	2cm5_A	N/A	N/A
4	N/A	2e-44	N/A	N/A	N/A	N/A	3n5a_A	N/A	N/A
4		2e-44	0.061	0.080	0.158		4ECD_B	N/A
5	N/A	4e-44	N/A	N/A	N/A	N/A	2uzp_C	N/A	N/A
5		4e-44	0.053	0.075	0.162		1Q1L_C	N/A
6		1e-40	0.122	0.129	0.157		1QXO_B	N/A
6	N/A	1e-40	N/A	N/A	N/A	N/A	4ldc_A	N/A	N/A
7		2e-38	0.130	0.141	0.183		1R53_A	N/A
7	N/A	2e-38	N/A	N/A	N/A	N/A	3m7f_B	N/A	N/A
8		2e-37	0.044	0.067	0.158		1SQ1_A	N/A
8	N/A	2e-37	N/A	N/A	N/A	N/A	1wfm_A	N/A	N/A
9		3e-37	0.034	0.044	0.083		2PFF_B	N/A
9	N/A	3e-37	N/A	N/A	N/A	N/A	3f04_A	N/A	N/A
10		8e-36	0.028	0.059	0.182		2PFF_B	N/A
10	N/A	8e-36	N/A	N/A	N/A	N/A	4mjj_A	N/A	N/A

References

Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]