Pcons.net Protein Structure Prediction Meta Server Friday, March 29 2024
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23327 : syt1

Your submitted sequence: sequence (419 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.9
21.2130.0000.0030.015 1B1V_AN/A
2
ffas.9
-0.697E+010.0280.0850.313 1ESO_AN/A
3
ffas.7
-0.682E+020.2000.2410.406 1Q1L_AN/A
4
pgenthreader.6
63.4630.1580.2110.423 1Q1L_AN/A
5
rpsblast.5
4e-440.0530.0750.162 1Q1L_CN/A
6
ffas.6
-0.685E+020.2150.2600.439 1QXO_AN/A
7
pgenthreader.2
75.1900.2010.2530.461 1QXO_AN/A
8
rpsblast.6
1e-400.1220.1290.157 1QXO_BN/A
9
ffas.2
-0.733E+020.2170.2570.419 1R52_AN/A
10
pgenthreader.5
66.9670.1980.2410.415 1R53_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center