Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23325 : VIRT-43716:5'3' FRAME 3, START_POS=118

Your submitted sequence: sequence (300 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader
Queued locally: blast lomets itasser hhpred2

PCONS (only used 19 models from 2 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	13.000	0.096	0.478	2JMI_A	N/A
2	ffas.3	-0.186E+01	0.088	0.441	2AB7_A	N/A
3	pgenthreader.8	13.000	0.075	0.375	2WH9_A	N/A
4	ffas.8	-0.157E+01	0.068	0.342	2B5L_C	N/A
5	pgenthreader.2	13.000	0.062	0.310	1CNN_A	N/A
6	ffas.9	-0.155E+01	0.062	0.310	1CNN_A	N/A
7	pgenthreader.10	13.000	0.058	0.288	2LXH_C	N/A
8	pgenthreader.4	13.000	0.057	0.285	4NEH_B	N/A
9	pgenthreader.5	13.000	0.057	0.283	2B5B_A	N/A
10	pgenthreader.7	13.000	0.055	0.277	1V4Q_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.