Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

Main Menu

Submission

23324 :

Your submitted sequence: sequence (365 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.12	-0.122E+03	0.375	0.431	0.657	1A9B_A	3.30.500.10.1.1 2.60.40.10.5.1
2	ffas.3	-0.130E+03	0.380	0.429	0.625	1BII_A	3.30.500.10.1.1 2.60.40.10.5.1
3	ffas.14	-0.121E+03	0.397	0.445	0.635	1E27_A	3.30.500.10.1.1 2.60.40.10.5.1
4	ffas.18	-0.121E+03	0.350	0.403	0.614	1EFX_A	3.30.500.10.1.1 2.60.40.10.5.1
5	ffas.16	-0.121E+03	0.392	0.441	0.639	1HSA_A	3.30.500.10.1.1 2.60.40.10.5.1
6	rpsblast.1	1e-111	0.113	0.181	0.451	1IGY_D	2.60.40.10.6.4 2.60.40.10.8.1 2.60.40.10.29.2 2.60.40.10.18.2
7	pgenthreader.3	150.464	0.483	0.514	0.640	1K5N_A	3.30.500.10.1.1 2.60.40.10.5.1
8	ffas.13	-0.122E+03	0.386	0.432	0.617	1KJM_A	3.30.500.10.1.1 2.60.40.10.5.1
9	ffas.5	-0.123E+03	0.336	0.398	0.646	1M05_A	3.30.500.10.1.1 2.60.40.10.5.1
10	rpsblast.2	1e-110	0.118	0.182	0.436	1MCO_H	2.60.40.10.23.4 2.60.40.10.24.1 2.60.40.10.29.1 2.60.40.10.18.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.