Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23323 : Hunduma Dinka

Your submitted sequence: sequence (335 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.9	29.701	0.025	0.087	0.333	1FUJ_A	2.40.10.10.4.3 2.40.10.10.8.3
2	ffas.1	-0.404E+02	0.049	0.165	0.629	1GZM_A	1.20.1070.10.6.1
3	pgenthreader.6	32.329	0.017	0.081	0.337	1IJQ_A	2.120.10.30.2.1
4	rpsblast.3	1.4	0.001	0.001	-0.001	1QZV_U	N/A
5	pgenthreader.1	38.676	0.242	0.329	0.679	1U19_A	1.20.1070.10.6.1
6	pgenthreader.3	34.541	0.036	0.129	0.500	1X38_A	3.20.20.300.1.1 3.40.50.1700.1.1
7	rpsblast.9	86	0.001	0.004	0.015	1YRV_A	N/A
8	pgenthreader.8	30.084	0.024	0.093	0.369	1ZKP_A	N/A
9	pgenthreader.10	29.551	0.015	0.068	0.279	2IUM_A	N/A
10	rpsblast.8	78	0.016	0.018	0.028	2KFK_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.