Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23323 : Hunduma Dinka

Your submitted sequence: sequence (335 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	38.676	0.242	0.329	0.679	1U19_A	1.20.1070.10.6.1
2	ffas.1	-0.404E+02	0.049	0.165	0.629	1GZM_A	1.20.1070.10.6.1
3	ffas.13	-0.298E+02	0.045	0.162	0.628	4DKL_A	N/A
4	ffas.6	-0.377E+02	0.048	0.161	0.615	2KS9_A	N/A
5	ffas.5	-0.384E+02	0.041	0.160	0.637	2Y00_A	N/A
6	ffas.10	-0.331E+02	0.044	0.160	0.623	2Z73_A	N/A
7	ffas.4	-0.400E+02	0.038	0.159	0.645	2YDO_A	N/A
8	ffas.12	-0.307E+02	0.042	0.159	0.626	4DJH_A	N/A
9	ffas.9	-0.343E+02	0.042	0.159	0.626	3SN6_R	N/A
10	ffas.18	-0.238E+02	0.041	0.158	0.624	4DAJ_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.