Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

Main Menu

Submission

23321 : id:23320:1-117,410-577

Your submitted sequence: sequence (285 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.7	-0.386E+02	0.188	0.195	0.222	1FQT_A	2.102.10.10.7.1
2	pgenthreader.3	39.287	0.197	0.197	0.195	1FQT_A	2.102.10.10.7.1
3	rpsblast.2	2e-04	0.172	0.163	0.128	1FQT_B	2.102.10.10.7.1
4	ffas.9	-0.378E+02	0.133	0.139	0.161	1SJG_A	2.102.10.10.6.1
5	ffas.1	-0.409E+02	0.184	0.182	0.172	1VCK_A	N/A
6	ffas.10	-0.375E+02	0.163	0.165	0.173	1VM9_A	2.102.10.10.6.1
7	ffas.20	-0.343E+02	0.108	0.106	0.097	1WQL_A	3.90.380.10.2.1 2.102.10.10.1.2
8	ffas.12	-0.370E+02	0.177	0.176	0.170	1WW9_A	N/A
9	ffas.14	-0.351E+02	0.179	0.162	0.093	1Z01_A	N/A
10	rpsblast.9	0.015	0.148	0.140	0.110	1Z03_E	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.