Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23320 : pcmah

Your submitted sequence: sequence (577 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.188E+02	0.008	0.025	0.091	1FQT_A	2.102.10.10.7.1
2	ffas.11	-0.184E+02	0.005	0.018	0.071	1SJG_A	2.102.10.10.6.1
3	ffas.12	-0.183E+02	0.007	0.021	0.077	1VCK_A	N/A
4	ffas.4	-0.298E+02	0.068	0.085	0.151	1VJN_A	N/A
5	rpsblast.6	1e-11	0.030	0.041	0.084	1VJN_A	N/A
6	ffas.10	-0.186E+02	0.006	0.019	0.072	1VM9_A	2.102.10.10.6.1
7	ffas.14	-0.179E+02	0.012	0.027	0.086	1WW9_A	N/A
8	pgenthreader.8	17.525	0.058	0.082	0.177	1Y44_A	3.60.15.10.9.1
9	pgenthreader.9	17.525	0.007	0.015	0.046	1Y44_A	3.60.15.10.9.1
10	ffas.8	-0.193E+02	0.097	0.123	0.229	1ZKP_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.