Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23319 : ATPYL2

Your submitted sequence: sequence (190 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.20	-0.607E+02	0.343	0.357	0.412	1E09_A	3.30.530.20.2.4
2	rpsblast.6	9e-30	0.311	0.301	0.261	1H2O_A	3.30.530.20.2.4
3	ffas.18	-0.613E+02	0.351	0.350	0.344	1ICX_A	3.30.530.20.2.3
4	ffas.16	-0.623E+02	0.341	0.357	0.421	1IFV_A	3.30.530.20.2.3
5	ffas.17	-0.617E+02	0.325	0.335	0.377	1TW0_A	N/A
6	ffas.14	-0.632E+02	0.320	0.339	0.417	1XDF_A	3.30.530.20.2.1
7	rpsblast.9	4e-28	0.329	0.327	0.319	2BK0_B	N/A
8	ffas.15	-0.632E+02	0.295	0.309	0.364	2K7H_A	N/A
9	pgenthreader.8	54.897	0.327	0.335	0.366	2LE1_A	N/A
10	ffas.19	-0.611E+02	0.314	0.319	0.341	2LPX_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.