Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23318 : id:23317:1-78,402-558

Your submitted sequence: sequence (235 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.6	24.067	0.027	0.082	0.302	1AGX_A	N/A
2	ffas.7	-0.652E+01	0.015	0.031	0.094	1BQY_A	2.40.10.10.5.3 2.40.10.10.20.2
3	pgenthreader.7	23.666	0.009	0.014	0.035	1EYO_A	N/A
4	pgenthreader.10	23.097	0.023	0.073	0.271	1IZL_B	N/A
5	rpsblast.9	22	0.013	0.019	0.044	1J6X_A	3.30.1360.80.1.3
6	pgenthreader.1	25.989	0.028	0.089	0.333	1NNS_A	3.40.50.1170.1.3 3.40.50.40.2.2
7	ffas.9	-0.635E+01	0.015	0.032	0.098	1OP0_A	N/A
8	rpsblast.8	15	0.007	0.026	0.103	1PPJ_P	1.20.810.10.1.1
9	rpsblast.7	11	0.012	0.020	0.052	1Q90_D	N/A
10	pgenthreader.3	24.692	0.015	0.026	0.072	1SOP_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.