Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23313 : id:23312:1-195

Your submitted sequence: sequence (195 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.467E+02	0.207	0.249	0.418	1CX1_A	2.60.120.260.34.1
2	rpsblast.8	7e-04	0.183	0.179	0.163	1CX1_A	2.60.120.260.34.1
3	ffas.13	-0.387E+02	0.161	0.179	0.253	1DYO_A	2.60.120.260.22.1
4	rpsblast.7	1e-05	0.184	0.174	0.135	1GU3_A	2.60.120.260.29.1
5	ffas.9	-0.464E+02	0.233	0.260	0.368	1GUI_A	2.60.120.260.19.1
6	pgenthreader.5	44.951	0.244	0.265	0.348	1GUI_A	2.60.120.260.19.1
7	rpsblast.4	2e-07	0.247	0.264	0.334	1GUI_A	2.60.120.260.19.1
8	ffas.12	-0.396E+02	0.160	0.164	0.178	1H6X_A	2.60.120.260.22.1
9	ffas.11	-0.399E+02	0.177	0.188	0.232	1H6Y_A	2.60.120.260.22.1
10	ffas.10	-0.441E+02	0.232	0.260	0.372	1K42_A	2.60.120.260.33.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.