Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23312 : Sukhada Kulkarni

Your submitted sequence: sequence (369 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.374E+02	0.050	0.081	0.204	1CX1_A	2.60.120.260.34.1
2	ffas.14	-0.319E+02	0.051	0.073	0.161	1DYO_A	2.60.120.260.22.1
3	rpsblast.9	2e-07	0.029	0.053	0.150	1GU3_A	2.60.120.260.29.1
4	ffas.10	-0.358E+02	0.067	0.091	0.189	1GUI_A	2.60.120.260.19.1
5	rpsblast.10	3e-07	0.099	0.113	0.169	1GUI_A	2.60.120.260.19.1
6	ffas.13	-0.327E+02	0.052	0.071	0.148	1H6X_A	2.60.120.260.22.1
7	ffas.12	-0.332E+02	0.051	0.067	0.129	1H6Y_A	2.60.120.260.22.1
8	ffas.11	-0.354E+02	0.067	0.086	0.163	1K42_A	2.60.120.260.33.1
9	ffas.8	-0.362E+02	0.053	0.063	0.105	1ULO_A	N/A
10	ffas.17	-0.163E+02	0.050	0.069	0.143	1V0A_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.