Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23312 : Sukhada Kulkarni

Your submitted sequence: sequence (369 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.2	61.298	0.115	0.193	0.506	2ZXQ_A	N/A
2	pgenthreader.1	75.088	0.115	0.188	0.482	3ECQ_A	N/A
3	pgenthreader.10	55.395	0.047	0.137	0.498	1W99_A	N/A
4	rpsblast.5	1e-17	0.119	0.136	0.203	4BJ0_A	N/A
5	ffas.9	-0.362E+02	0.078	0.135	0.361	3K4Z_A	N/A
6	rpsblast.4	1e-18	0.111	0.134	0.224	3P6B_A	N/A
7	pgenthreader.3	59.422	0.048	0.123	0.422	4CCD_A	N/A
8	pgenthreader.9	42.384	0.104	0.118	0.175	2ZEX_A	N/A
9	rpsblast.6	2e-10	0.111	0.116	0.134	2ZEZ_C	N/A
10	rpsblast.10	3e-07	0.099	0.113	0.169	1GUI_A	2.60.120.260.19.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.