Pcons.net Protein Structure Prediction Meta Server Wednesday, October 20 2021
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23311 : tm2domain

Your submitted sequence: sequence (193 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.6
4e-060.0870.0900.104 1DCE_C1.25.40.120.2.1 2.60.40.1130.1.1 3.80.10.10.11.1
2
pgenthreader.5
49.1930.3030.3370.472 1H6T_A3.80.10.10.4.1 2.60.40.1220.2.1
3
ffas.5
-0.251E+020.2740.3000.406 1H6U_AN/A
4
ffas.6
-0.244E+020.2600.2790.355 1M9S_A3.80.10.10.4.1 2.60.40.1220.2.1 2.30.30.170.1.2 2.30.30.170.2.1 2.30.30.170.1.1
5
pgenthreader.4
49.3030.3170.3430.449 1M9S_A3.80.10.10.4.1 2.60.40.1220.2.1 2.30.30.170.1.2 2.30.30.170.2.1 2.30.30.170.1.1
6
pgenthreader.10
46.8030.2880.3150.423 1O6V_AN/A
7
ffas.2
-0.262E+020.2360.2670.392 1OGQ_A3.80.10.10.3.1
8
ffas.11
-0.235E+020.2630.2880.389 1OTM_A3.80.10.10.4.1
9
ffas.12
-0.233E+020.1870.1990.248 1WWL_A3.70.10.10.6.1
10
pgenthreader.7
47.8510.1860.2170.340 1XKU_A3.80.10.10.5.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center