Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23309 : RadA_RecA

Your submitted sequence: sequence (458 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.19	-0.164E+02	0.170	0.188	0.258	1CR0_A	3.40.50.300.81.1
2	pgenthreader.9	77.579	0.160	0.188	0.299	1G19_A	3.40.50.300.22.1 3.30.250.10.1.2
3	ffas.6	-0.261E+02	0.122	0.139	0.206	1G8Y_A	3.40.50.300.69.1
4	ffas.7	-0.217E+02	0.162	0.180	0.250	1N0W_A	3.40.50.300.18.1
5	ffas.18	-0.165E+02	0.174	0.197	0.288	1PZN_A	1.10.150.20.11.2 3.40.50.300.18.3
6	ffas.14	-0.177E+02	0.172	0.196	0.290	1T4G_A	1.10.150.20.11.1 3.40.50.300.18.2
7	ffas.5	-0.276E+02	0.173	0.201	0.314	1TF7_A	3.40.50.300.115.1 3.40.50.300.127.1
8	pgenthreader.2	86.281	0.150	0.180	0.301	1U94_A	3.40.50.300.22.1 3.30.250.10.1.1
9	rpsblast.7	1e-56	0.118	0.130	0.177	1U94_A	3.40.50.300.22.1 3.30.250.10.1.1
10	ffas.13	-0.178E+02	0.168	0.193	0.292	1V5W_A	3.40.50.300.18.4

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.