Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

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Submission

23309 : RadA_RecA

Your submitted sequence: sequence (458 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.3	1e-62	0.207	0.225	0.297	3LDA_A	N/A
2	ffas.2	-0.385E+02	0.191	0.214	0.306	2DR3_A	N/A
3	ffas.17	-0.165E+02	0.185	0.205	0.284	3LDA_A	N/A
4	ffas.9	-0.195E+02	0.176	0.204	0.316	4DC9	N/A
5	ffas.5	-0.276E+02	0.173	0.201	0.314	1TF7_A	3.40.50.300.115.1 3.40.50.300.127.1
6	ffas.15	-0.173E+02	0.177	0.201	0.297	3ETL_A	N/A
7	ffas.8	-0.201E+02	0.174	0.200	0.304	2GDJ_A	N/A
8	ffas.4	-0.366E+02	0.173	0.199	0.305	2ZTS_A	N/A
9	pgenthreader.3	83.064	0.174	0.198	0.296	2DR3_A	N/A
10	pgenthreader.5	79.636	0.174	0.198	0.294	3HR8_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.