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© Arne Elofsson

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23308 : 218-321

Your submitted sequence: sequence (322 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.3
44.0840.0640.1210.348 4HT3_AN/A
2
pgenthreader.5
43.7510.0620.1160.332 1TV8_AN/A
3
pgenthreader.6
43.5920.0680.1150.301 4LSB_AN/A
4
pgenthreader.8
43.1880.0610.1140.328 3TVA_AN/A
5
pgenthreader.4
44.0040.0600.1140.329 3VC5_AN/A
6
ffas.1
-0.119E+020.0690.1110.279 3KTS_AN/A
7
pgenthreader.1
44.3940.0600.1100.312 1I60_A3.20.20.150.4.1
8
ffas.4
-0.102E+020.0580.1090.313 1U5H_A3.20.20.60.7.1
9
ffas.10
-0.702E+010.0570.1040.293 1RV8_A3.20.20.70.3.2
10
ffas.2
-0.108E+020.0570.1030.285 1Z6K_A3.20.20.60.7.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center