Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23303 : Cysteine-proteinase2

Your submitted sequence: sequence (337 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.12	-0.102E+03	0.398	0.418	0.498	1AIM_A	N/A
2	ffas.7	-0.108E+03	0.499	0.534	0.673	1BY8_A	3.90.70.10.11.2
3	pgenthreader.3	138.687	0.516	0.549	0.681	1BY8_A	3.90.70.10.11.2
4	ffas.5	-0.109E+03	0.476	0.519	0.691	1CJL_A	N/A
5	ffas.4	-0.110E+03	0.489	0.529	0.687	1CS8_A	3.90.70.10.11.1
6	pgenthreader.1	148.446	0.502	0.537	0.676	1CS8_A	3.90.70.10.11.1
7	ffas.18	-0.100E+03	0.421	0.430	0.465	1GEC_E	3.90.70.10.3.2
8	rpsblast.1	4e-61	0.287	0.287	0.285	1JQP_A	2.40.128.80.1.1 3.90.70.10.8.1
9	ffas.9	-0.105E+03	0.419	0.432	0.483	1M6D_A	3.90.70.10.1.2
10	ffas.1	-0.116E+03	0.475	0.509	0.644	1PCI_A	3.90.70.10.14.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.