Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23301 : hVASH1

Your submitted sequence: sequence (365 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 28 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.565E+01	0.026	0.033	0.060	1A7M_A	N/A
2	pgenthreader.7	33.374	0.024	0.054	0.176	1B7Y_B	3.30.56.10.1.1 2.40.50.140.30.1 3.50.40.10.1.1 3.30.56.20.1.1 3.30.930.10.17.1 3.30.70.380.1.1
3	ffas.6	-0.571E+01	0.018	0.026	0.059	1BFI_A	N/A
4	pgenthreader.6	33.571	0.025	0.047	0.137	1DTZ_A	3.40.190.10.47.1 3.40.190.10.8.1 3.40.190.10.57.3 3.40.190.10.33.1
5	ffas.3	-0.736E+01	0.016	0.012	-0.005	1FFK_T	N/A
6	pgenthreader.2	16.366	0.021	0.035	0.092	1GQF_A	3.40.50.1460.4.2
7	pgenthreader.3	16.366	0.001	0.013	0.059	1GQF_A	3.40.50.1460.4.2
8	rpsblast.10	0.81	0.014	0.015	0.021	1GWE_A	N/A
9	ffas.7	-0.566E+01	0.019	0.029	0.068	1H9O_A	3.30.505.10.7.1
10	pgenthreader.4	33.859	0.025	0.045	0.126	1IRU_G	3.60.20.10.11.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.