Pcons.net Protein Structure Prediction

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Friday, April 19 2024

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Submission

23301 : hVASH1

Your submitted sequence: sequence (365 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 28 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	36.382	0.031	0.086	0.306	1U1J_A	N/A
2	pgenthreader.9	32.930	0.032	0.085	0.296	4F3T_A	N/A
3	pgenthreader.10	32.766	0.027	0.068	0.231	1Z05_A	N/A
4	pgenthreader.5	33.674	0.026	0.066	0.226	4ED9_A	N/A
5	rpsblast.2	0.001	0.031	0.059	0.170	2PFF_D	N/A
6	pgenthreader.8	33.043	0.029	0.057	0.169	2W0M_A	N/A
7	pgenthreader.7	33.374	0.024	0.054	0.176	1B7Y_B	3.30.56.10.1.1 2.40.50.140.30.1 3.50.40.10.1.1 3.30.56.20.1.1 3.30.930.10.17.1 3.30.70.380.1.1
8	pgenthreader.6	33.571	0.025	0.047	0.137	1DTZ_A	3.40.190.10.47.1 3.40.190.10.8.1 3.40.190.10.57.3 3.40.190.10.33.1
9	pgenthreader.4	33.859	0.025	0.045	0.126	1IRU_G	3.60.20.10.11.2
10	ffas.5	-0.663E+01	0.025	0.044	0.118	4AEZ_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.