Pcons.net Protein Structure Prediction Meta Server Wednesday, November 25 2020
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23301 : hVASH1

Your submitted sequence: sequence (365 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 28 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.1
36.3820.0310.0860.306 1U1J_AN/A
2
pgenthreader.9
32.9300.0320.0850.296 4F3T_AN/A
3
pgenthreader.10
32.7660.0270.0680.231 1Z05_AN/A
4
pgenthreader.5
33.6740.0260.0660.226 4ED9_AN/A
5
rpsblast.2
0.0010.0310.0590.170 2PFF_DN/A
6
pgenthreader.8
33.0430.0290.0570.169 2W0M_AN/A
7
pgenthreader.7
33.3740.0240.0540.176 1B7Y_B3.30.56.10.1.1 2.40.50.140.30.1 3.50.40.10.1.1 3.30.56.20.1.1 3.30.930.10.17.1 3.30.70.380.1.1
8
pgenthreader.6
33.5710.0250.0470.137 1DTZ_A3.40.190.10.47.1 3.40.190.10.8.1 3.40.190.10.57.3 3.40.190.10.33.1
9
pgenthreader.4
33.8590.0250.0450.126 1IRU_G3.60.20.10.11.2
10
ffas.5
-0.663E+010.0250.0440.118 4AEZ_BN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center