Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23300 : PGL_GLEAN_10006131 LOCUS=CHR4:18061291:18064272:- [TRANSLATE_TABLE: STANDARD]

Your submitted sequence: sequence (471 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	129.932	0.102	0.191	0.545	1OXW_A	3.40.1090.10.1.1
2	ffas.1	-0.832E+02	0.091	0.182	0.545	1OXW_A	3.40.1090.10.1.1
3	rpsblast.1	7e-31	0.097	0.166	0.441	1OXW_B	3.40.1090.10.1.1
4	pgenthreader.2	46.154	0.059	0.106	0.296	4AKF_A	N/A
5	ffas.2	-0.387E+02	0.041	0.079	0.229	4AKX_B	N/A
6	pgenthreader.5	14.420	0.029	0.077	0.270	3IA7_A	N/A
7	ffas.3	-0.350E+02	0.039	0.075	0.218	3TU3_B	N/A
8	pgenthreader.9	16.231	0.026	0.062	0.207	3Q3Q_A	N/A
9	pgenthreader.8	37.841	0.022	0.059	0.206	1EA9_C	N/A
10	pgenthreader.3	16.807	0.025	0.057	0.187	3UBM_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.