Pcons.net Protein Structure Prediction Meta Server Saturday, May 21 2022
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23300 : PGL_GLEAN_10006131 LOCUS=CHR4:18061291:18064272:- [TRANSLATE_TABLE: STANDARD]

Your submitted sequence: sequence (471 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.1
129.9320.1020.1910.545 1OXW_A3.40.1090.10.1.1
2
ffas.1
-0.832E+020.0910.1820.545 1OXW_A3.40.1090.10.1.1
3
rpsblast.1
7e-310.0970.1660.441 1OXW_B3.40.1090.10.1.1
4
pgenthreader.2
46.1540.0590.1060.296 4AKF_AN/A
5
ffas.2
-0.387E+020.0410.0790.229 4AKX_BN/A
6
pgenthreader.5
14.4200.0290.0770.270 3IA7_AN/A
7
ffas.3
-0.350E+020.0390.0750.218 3TU3_BN/A
8
pgenthreader.9
16.2310.0260.0620.207 3Q3Q_AN/A
9
pgenthreader.8
37.8410.0220.0590.206 1EA9_CN/A
10
pgenthreader.3
16.8070.0250.0570.187 3UBM_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center