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Saturday, April 20 2024

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Submission

23299 : NP_001354919.1 E3 UBIQUITIN-PROTEIN LIGASE MDM2 ISOFORM 2 [HOMO SAPIENS]

Your submitted sequence: sequence (491 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

rpsblast

Rank	Method Score	Pcons	Pcomb	ProQ2	ProQ / ProQresSum	Template	CATH
1	4e-52	-nan	N/A	N/A	/ 0.000	2LZG_A	N/A
1	4e-52	N/A	0.011	0.053		2PFF_B	N/A
2	1e-47	-nan	N/A	N/A	/ 0.000	4OGN_A	N/A
2	1e-47	N/A	0.003	0.013		2PFF_D	N/A
3	9e-46	N/A	0.000	0.002		1QZV_U	N/A
3	9e-46	-nan	N/A	N/A	/ 0.000	4N5T_A	N/A
4	4e-44	-nan	N/A	N/A	/ 0.000	4J74_A	N/A
4	4e-44	N/A	-0.001	-0.003		2KXJ_A	N/A
5	9e-43	-nan	N/A	N/A	/ 0.000	3FEA_A	N/A
5	9e-43	N/A	-0.012	-0.059		2PFF_B	N/A
6	2e-22	-nan	N/A	N/A	/ 0.000	2C6A_A	N/A
6	2e-22	N/A	-0.008	-0.038		2F1M_B	N/A
7	1e-20	-nan	N/A	N/A	/ 0.000	2CR8_A	N/A
7	1e-20	N/A	0.006	0.031		1DUS_A	3.40.50.150.21.1
8	2e-12	-nan	N/A	N/A	/ 0.000	2VJE_C	N/A
8	2e-12	N/A	0.003	0.016		3TQD_A	N/A
9	4e-11	-nan	N/A	N/A	/ 0.000	2VJE_D	N/A
10		N/A	0.009	0.045		2PFF_B	N/A

References

Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]