Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 17 2024

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Submission

23298 : PGL_GLEAN_10004961 LOCUS=CHR4:132043651:132048408: [TRANSLATE_TABLE: STANDARD]

Your submitted sequence: sequence (603 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.7	-0.109E+02	0.001	0.008	0.035	1NAY_A	1.20.5.320.1.2
2	rpsblast.7	3.8	0.001	0.001	0.002	1QZV_U	N/A
3	rpsblast.10	5.3	0.002	-0.001	-0.011	1TT8_A	3.40.1410.10.1.1
4	ffas.1	-0.202E+02	0.003	0.008	0.027	1WCK_A	N/A
5	pgenthreader.8	34.984	0.003	0.020	0.087	1WTH_A	N/A
6	rpsblast.6	2.0	0.002	0.004	0.011	1ZTM_C	N/A
7	pgenthreader.4	21.012	0.003	0.022	0.098	2BAF_A	N/A
8	pgenthreader.5	21.012	0.000	0.007	0.036	2BAF_A	N/A
9	pgenthreader.1	44.597	0.003	0.029	0.133	2C3F_A	N/A
10	rpsblast.1	3e-07	0.006	0.010	0.025	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.