Pcons.net Protein Structure Prediction

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Friday, April 19 2024

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Submission

23296 : PIPK5_full

Your submitted sequence: sequence (772 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.2	118.734	0.081	0.117	0.262	2YBX_A	N/A
2	ffas.1	-0.724E+02	0.085	0.115	0.233	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
3	rpsblast.3	9e-76	0.081	0.112	0.235	1BO1_B	3.30.800.10.1.1 3.30.810.10.1.1
4	rpsblast.1	2e-81	0.079	0.111	0.239	2YBX_A	N/A
5	pgenthreader.1	123.168	0.075	0.099	0.194	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
6	ffas.3	-0.686E+02	0.079	0.097	0.170	2YBX_A	N/A
7	ffas.2	-0.712E+02	0.067	0.083	0.149	2GK9_A	3.30.800.10.1.1
8	rpsblast.2	3e-76	0.066	0.077	0.122	2GK9_B	3.30.800.10.1.1
9	pgenthreader.3	81.736	0.059	0.070	0.116	2GK9_A	3.30.800.10.1.1
10	ffas.7	-0.238E+02	0.011	0.036	0.136	2FKG_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.