Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23295 : PIPK5_PIPK

Your submitted sequence: sequence (392 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.119E+03	0.179	0.262	0.592	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
2	pgenthreader.1	126.734	0.162	0.216	0.432	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
3	rpsblast.3	8e-73	0.192	0.257	0.516	1BO1_B	3.30.800.10.1.1 3.30.810.10.1.1
4	rpsblast.7	0.12	0.001	0.001	0.002	1QZV_U	N/A
5	ffas.2	-0.113E+03	0.142	0.192	0.392	2GK9_A	3.30.800.10.1.1
6	pgenthreader.3	91.739	0.132	0.165	0.295	2GK9_A	3.30.800.10.1.1
7	rpsblast.2	3e-75	0.150	0.183	0.317	2GK9_B	3.30.800.10.1.1
8	pgenthreader.7	35.441	0.026	0.068	0.238	2GZA_A	N/A
9	ffas.4	-0.728E+01	0.048	0.073	0.172	2IEW_A	N/A
10	pgenthreader.9	34.941	0.026	0.068	0.236	2NUT_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.