Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23290 : id:23289:1-164,211-366

Your submitted sequence: sequence (320 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 38 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	41.684	0.016	0.060	0.235	1KI0_A	2.40.20.10.1.4 2.40.20.10.1.5 2.40.20.10.1.3
2	pgenthreader.8	36.857	0.002	0.036	0.171	1MV3_A	N/A
3	pgenthreader.6	40.082	0.018	0.045	0.151	1N7D_A	N/A
4	rpsblast.9	1e-04	0.049	0.050	0.054	1X4J_A	N/A
5	ffas.13	-0.177E+02	0.046	0.049	0.062	1Z6U_A	N/A
6	pgenthreader.4	40.632	0.008	0.049	0.214	2C3F_A	N/A
7	ffas.12	-0.181E+02	0.048	0.055	0.084	2CKL_B	N/A
8	ffas.9	-0.205E+02	0.073	0.066	0.037	2EA5_A	N/A
9	rpsblast.7	3e-06	0.076	0.067	0.029	2EA5_A	N/A
10	ffas.7	-0.209E+02	0.081	0.081	0.082	2ECG_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.