Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23287 : AXU08810.1

Your submitted sequence: sequence (263 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.16	-0.442E+02	0.256	0.280	0.376	1J7I_A	3.30.200.20.26.1 3.90.1200.10.1.1
2	ffas.18	-0.438E+02	0.275	0.299	0.397	1ND4_A	N/A
3	rpsblast.5	1e-11	0.250	0.249	0.244	1ND4_B	N/A
4	ffas.10	-0.482E+02	0.281	0.308	0.417	1NW1_A	3.10.450.110.1.1 3.90.1200.10.2.1
5	ffas.5	-0.489E+02	0.333	0.368	0.506	2CKO_A	N/A
6	ffas.11	-0.466E+02	0.328	0.367	0.525	2I7Q_A	N/A
7	ffas.4	-0.501E+02	0.310	0.325	0.386	2IG7_A	N/A
8	ffas.2	-0.518E+02	0.294	0.335	0.498	2QG7_A	N/A
9	pgenthreader.7	63.064	0.328	0.371	0.541	2QG7_A	N/A
10	ffas.15	-0.453E+02	0.326	0.345	0.423	3ATS_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.