Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23286 : Weidong Luo

Your submitted sequence: sequence (288 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.8	68.702	0.220	0.221	0.224	1BVK_A	2.60.40.10.4.5
2	pgenthreader.3	70.021	0.227	0.232	0.252	1BWW_A	2.60.40.10.4.5
3	rpsblast.9	2e-12	0.173	0.186	0.236	1DQT_B	2.60.40.10.91.1
4	pgenthreader.9	68.499	0.232	0.232	0.232	1EEQ_A	2.60.40.10.3.2
5	rpsblast.7	8e-13	0.224	0.218	0.195	1FO0_A	2.60.40.10.9.3
6	ffas.7	-0.599E+02	0.229	0.241	0.291	1FYT_D	2.60.40.10.69.3 2.60.40.10.34.1
7	ffas.20	-0.582E+02	0.230	0.241	0.285	1G6R_A	2.60.40.10.69.3 2.60.40.10.34.2
8	ffas.6	-0.602E+02	0.228	0.240	0.290	1NFD_A	2.60.40.10.69.1 2.60.40.10.34.2
9	ffas.16	-0.584E+02	0.163	0.156	0.129	1YMM_D	2.60.40.10.9.4
10	ffas.13	-0.586E+02	0.227	0.238	0.280	1ZGL_M	2.60.40.10.69.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.