Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23284 : LLCBL2

Your submitted sequence: sequence (475 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.1	6e-70	0.213	0.251	0.405	2GJJ_A	N/A
2	pgenthreader.3	94.628	0.215	0.249	0.386	3UX9_B	N/A
3	ffas.7	-0.851E+02	0.203	0.245	0.411	2GJJ_A	N/A
4	ffas.12	-0.828E+02	0.199	0.240	0.404	3H3B_C	N/A
5	ffas.11	-0.831E+02	0.197	0.240	0.411	1H8N_A	2.60.40.10.3.1 2.60.40.10.10.1
6	rpsblast.4	7e-62	0.203	0.238	0.379	1H8N_A	2.60.40.10.3.1 2.60.40.10.10.1
7	ffas.3	-0.895E+02	0.187	0.233	0.415	1JP5_A	2.60.40.10.20.1 2.60.40.10.38.2
8	ffas.10	-0.838E+02	0.192	0.230	0.383	3ET9_F	N/A
9	ffas.13	-0.820E+02	0.187	0.228	0.390	3ESV_F	N/A
10	ffas.5	-0.876E+02	0.180	0.227	0.415	1X9Q_A	2.60.40.10.20.1 2.60.40.10.32.3

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.