Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23283 : PHmod

Your submitted sequence: sequence (366 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.7	-0.841E+02	0.139	0.231	0.598	1GZM_A	1.20.1070.10.6.1
2	rpsblast.4	6e-04	0.034	0.031	0.018	1HOF_A	N/A
3	rpsblast.5	0.13	0.012	0.011	0.005	1QZV_U	N/A
4	pgenthreader.3	93.094	0.223	0.292	0.566	1U19_A	1.20.1070.10.6.1
5	rpsblast.10	12	0.039	0.070	0.193	2IPB_D	N/A
6	ffas.1	-0.924E+02	0.148	0.248	0.650	2KS9_A	N/A
7	pgenthreader.1	13.000	0.208	0.281	0.572	2KS9_A	N/A
8	pgenthreader.2	13.000	0.000	-0.000	-0.002	2KS9_A	N/A
9	ffas.3	-0.861E+02	0.070	0.157	0.506	2LNL	N/A
10	pgenthreader.4	13.929	0.074	0.157	0.489	2LNL_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.