Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23270 : James Davidson

Your submitted sequence: sequence (172 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.17	-0.557E+02	0.509	0.547	0.698	1BXL_A	1.10.437.10.3.1
2	pgenthreader.3	106.114	0.499	0.538	0.696	1BXL_A	1.10.437.10.3.1
3	ffas.2	-0.633E+02	0.554	0.581	0.691	1G5M_A	1.10.437.10.3.1
4	pgenthreader.1	115.639	0.543	0.580	0.730	1G5M_A	1.10.437.10.3.1
5	ffas.1	-0.639E+02	0.529	0.572	0.745	1GJH_A	1.10.437.10.3.1
6	pgenthreader.4	104.172	0.495	0.530	0.671	1LXL_A	N/A
7	ffas.8	-0.587E+02	0.340	0.354	0.412	1MK3_A	1.10.437.10.3.2
8	pgenthreader.10	84.053	0.333	0.360	0.470	1MK3_A	1.10.437.10.3.2
9	ffas.12	-0.565E+02	0.509	0.521	0.570	1O0L_A	1.10.437.10.3.2
10	pgenthreader.8	91.298	0.472	0.493	0.578	1O0L_A	1.10.437.10.3.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.